| LightCycler 96 |
Light Cycler | 7900HT | ||||||||||||
| ν |
β`q |
exon junction |
β« |
· |
Essential |
SYBR |
Thunderbird |
Thunderbird Next |
TB Green |
SYBR |
Thunderbird |
Thunderbird | Forward | Reverse |
| human |
ABCA1 |
84.2(1)/0.98(1)/60 |
GCACTGAGGAAGATGCTGAAA |
AGTTCCTGGAAGGTCTTGTTCAC |
||||||||||
| ABCG1 |
variant 2-7/6 |
98.1(1)/0.94(1)/60 |
GTTTGTGGGTGTCTCGTGCTC |
CACCAATCTGCCTACATCTTCCTAG |
||||||||||
| ACACA |
variant 1-5 |
104.2(1)/0.99(1)/60 |
97.7/0.82/1 |
CTTAAGGTGACTCGACAGTC |
CTGCCATCATAGGACAAGAG |
|||||||||
| ACLY |
variant 1-4 |
99.7/1/1 |
103.9/1/1 |
87.6/1/2 |
CTGGGAAGGAGTATGGGGTTC |
CAGTAGGGTTCCTGGCTCTGTTAC |
||||||||
| ARMC5 | variant 1-4/4 | 81 |
85.1/0.97/1 |
98.4/0.956/8 | 109/0.98/1 |
95.2/0.98/2 |
GTACGGCCTGCTGACCTATG | CAGGTGAGGCGTGACAGAATG | ||||||
| 90.9/0.97/3 |
CTGCATCATTTGCATGGTTGTC |
CTCTTCCAGCTCCTCCTCCAG |
||||||||||||
| variant 1-4/4 PX458-hARMC5-1p
|
265 | 82.4/0.94/1 |
AAAGGACCCAGCGACCAAC | ACTAGACGACGACACAGCGG | ||||||||||
| variant 1-4/4 PX458-hARMC5-2p
|
147 | 116.8/0.96/1 |
CTACTCGCGCTGCTACGG | |||||||||||
| CCNA2 |
all |
99/1/1 |
AAGAAACAGCCAGACATCACTAACAG |
GCACTGACATGGAAGACAGGAAC |
||||||||||
| CCNB1 |
all |
99.2/1/1 |
CCAGAACCTGAGCCAGAACC |
TGGAGAGGCAGTATCAACCAAAATAG |
||||||||||
| CCND1 |
98.8/1/1 |
TTATTGCGCTGCTACCGTTGA |
AACTGATCCTCCAATAGCAGCAAAC |
|||||||||||
| CCND2 |
all |
101.1/1/1 |
GCCTCCAAACTCAAAGAGACCAG |
TCAACTTCCCCAGCACCAC |
||||||||||
| CCNE1 |
all (v1,3-5) |
102.1/1/1 |
81.8/0.99/1 |
GAGAACTGTGTCAAGTGGATGGTTC |
GCTGTCTCTGTGGGTCTGTATGTTG |
|||||||||
| CYP11B1 |
variant 1,2/2 |
82.9(1)/0.80(1)/60 |
TGCGTGAACCTGCCTTG |
ACTCTCAAACTGGGTGCTTCCTC |
||||||||||
| 104.4/0.96/1 |
76.3/0.92/1 |
ACGCCATAGACTGGGTTGCTG |
GAACCTGCTGACACCTTGATCTTAG |
|||||||||||
| CYP11B2 |
P450aldo |
87.9(1)/0.97(1)/60 |
CGAGTGTTGGGTCCTCTGCTTC |
GCCCAATCCTGTCTCTCCTGTTG |
||||||||||
| 110.3/0.97/1 |
82.3/0.89/1 |
TCCTAGCCCAGCAGAGAGAGTTG |
CCCAGGAGATAAAGATGATGTGG |
|||||||||||
| CYP17A1 |
96/0.987/3 |
CGTAACCGTCTCCTCCTGCTG |
TGATAACTTCTGTGCCCTTGTCC |
|||||||||||
| CYP21A2 |
variant 1-4 |
107.1/0.99/3 |
CGTTGTGCCCTTAGCCTTG |
CAGAACTCATGTGGCCTCTCC |
||||||||||
| FASN |
83.4(1)/0.97(1)/60 |
95.6(1)/0.99(1)/60 |
101.1/0.97/1 |
CACCCAAGGCCAAGTACCATG |
GATACTTTCCCGTCGCATACC |
|||||||||
| FKBP5 |
95.2/0.98/1 |
Z103.3 |
AGCTATTCCAAGACTCAGATGATGC | CCCTCCCCACACACACTTTT | ||||||||||
| HMGCR |
variant 1,3/3 |
94.6/1/1 |
90.1/0.97/1 |
95.6/0.99/3 |
98.1/0.985/2 |
CTGCAGAGCAATAGGTCTTG |
GACGTGCAAATCTGCTAGTG |
|||||||
| HMGCS1 |
variant 1-9/9 |
96.0/1/1 |
98.4/0.995/4 |
92/0.995/2 |
CATACAGTGCTACCTCAGTG |
TTCAGCAACATCCGAGCTAG |
||||||||
| HSD3B2 |
variant 1+2 |
99.2/1/2 |
83.1/1/1 |
AGTGGGTTGGTTCCCTTGTG |
CAGGTGGGTGGAGTTTGATG |
|||||||||
| LDLR |
variant 1,2/5 |
~ |
AACCGCTGCATTCCTCAGTT |
TCTGAGTCACAGACGAACTG |
||||||||||
| variant 1-4,6/5 |
102.9/1/1 |
92.1/0.995/2 |
94.6/1/1 |
TGTTTTCTGTCGTGTGTGTTGG |
GTCAACCTGCCCCTCTCTGTC |
|||||||||
| NR1H2 (LXRΐ) |
variant 1,2/2 |
106.4(1)/1.00(1)/60 |
TATCGGCTCTCATCCCTTGG |
ACCCTTTCACCCCTTCTGG |
||||||||||
| NR1H3 (LXRΏ) |
variant 1-6/6 |
101.1(1)/0.99(1)/60 |
TGATGCCGAGTTTGCCTTG |
ATGGGGATGGTGGATGGAG |
||||||||||
| RPLP0 |
all (v1,2) |
143 |
89/0.96/2 |
93.8/1/1 |
92.7/0.978/7 |
89.7/1/1 |
106.9/1/3 |
GCTCCAAGCAGATGCAGCA |
CCGGATATGAGGCAGCAG |
|||||
| 98.1/1/2 |
TGATCAAGACTGGAGACAAAGTGG |
ATGACCAGCCCAAAGGAGAAG |
||||||||||||
| SCD |
96.1/1/1 |
80.5/0.98/1 |
AACTTGATACGTCCGTGTGTCC |
AGTTATCCACCGCTTCTCCAATG |
||||||||||
| SOD1 |
165 |
81.9-89.2 |
TGGCCGATGTGTCTATTGAA | TTACACCACAAGCCAAACGA | ||||||||||
| SREBF1 |
all (v1-13) |
144 |
80.0(1)/0.96(1)/65 85.9(1)/0.96(1)/60 |
91.2/0.972/4 |
107/0.985/2 |
GATGTTTGTTTGTTAGTGGGAGGAG |
TGGGAGGTGAGAAGGGACAAC |
|||||||
| Z |
all (v1-13) |
GTGCTGCAGGAGTCTGAGAGA | GCTGGACCAGACTCTGCCTT | |||||||||||
| SREBF2 |
91.9/0.993/4 |
92.1/0.993/3 |
GGGGCTGGGAGAAATGAAG |
GTGGAGGTAGGAGATGGGGTAG |
||||||||||
| STAR |
98.1(1)/1.00(1)/60 |
103.1/1/1 |
84/1/1 |
GGGCCTGAGAAGTCTTGCTTTATG |
TGCTTGTTCTGTGGTGTTGCTG |
|||||||||
| mouse |
Acaca |
Acc1 |
186 |
’ 85.8-88.2 |
GAGGTACCGAAGTGGCATCC | GTGACCTGAGCGTGGGAGAA | ||||||||
| 84 |
Z102.9% (1ρ) |
100.1(3)/1(3)/60 |
Z 92.9-97.1 |
Z96.3 |
AACTGGCCTTCTTGATGTTAGGAG | AGCACCGAGACTGAACTGTAAGG | ||||||||
| Acly |
variant 1+2 |
65 | Z93.2% (1ρ) |
102.9(3)/1(3)/60 |
Z 85.3-98.5 | Z |
Z106.7 | ACCCTTTCACTGGGGATCACA | GACAGGGATCAGGATTTCCTTG | |||||
| Adgre1 | F4/80 |
77.6 | Z93.2-96.8 | TTACGATGGAATTCTCCTTGTATATCAT | CACAGCAGGAAGGTGGCTATG | |||||||||
| Adipoq | 72.9-81.4 |
GATGGCAGAGATGGCACTCC | CTTGCCAGTGCTGCCGTCAT | |||||||||||
| Z 93.5% |
CAAGGCCGTTCTCTTCACCTAC | TCCCCATCCCCATACACCT | ||||||||||||
| Akr1b7 |
Z79.0 |
AAGCTCTGGGCATCTCCAAC | ATAAGGGTGGCTCTCAATCTGG | |||||||||||
| Arg1 |
102 |
85.8-93.0 |
GGCAACCTGTGTCCTTTCTC | ACACGATGTCTTTGGCAGAT | ||||||||||
| Armc5 |
Z 83% |
~ |
Z91.2 |
TGTGGCGCCGCTTACTTC | AGAAGAGGAAGAGTGGGTGTGG | |||||||||
| 98.3(1)/0.98(1)/65 |
100.3(3)/0.997(3)/60 |
Z 83.5-91.5 |
TCCTGACCTGCACTTCGTTCTG | AGCGGCACCAAATCCATC | ||||||||||
| Ccdc3 |
124 |
Z 88.7 |
TGGTCCAGGACTACTCTTATTTCTT | GAAAACATCCTTCTGTTCTCCTG | ||||||||||
| Ccl2 | Z 88.8-95.1 |
Z98.5-100.8 | CCACTCACCTGCTGCTACTCAT | TGGTGATCCTCTTGTAGCTCTCC | ||||||||||
| Cd36 | AAGAACAGCAGCAAAATCAAGG | AGACAGTGAAGGCTCAAAGATGG | ||||||||||||
| Cebpa | TGCCAAACTGAGACTCTTCACTAAC | CCCAAACATCCCTAAACCAAAA | ||||||||||||
| Clec4e |
126 |
CCAATTTCATGTGCTCCTCTTTG | CAGGTGGAGTGTGGGATGTG | |||||||||||
| Col1a1 |
Z92.8 |
GTGCTCCTGGTATTGCTGGT | GGCTCCTCGTTTTCCTTCTT | |||||||||||
| Col3a1 |
GGGTTTCCCTGGTCCTAAAG | GGAGAAAATGGGAAACCAGG | ||||||||||||
| Col6a3 |
variant 1+2 |
124 |
Z 90.5 |
Z95.7 |
CACCTCTTCAGGCAGCACAC | TCCACACAAGTCCCAGCATC | ||||||||
| Cox4i1 | TGATTGGCAAGAGAGCCATTTC | AGCGTAAGTGGGGAAAGCATAG | ||||||||||||
| Cul3 |
variant 1+2 |
85.2(1)/0.99(1)/65 |
GTTCTTGCAGCTGTGTTTTAGAAAG |
AGCACAGAGGAACGGACACAC |
||||||||||
| Cxcl12 |
CAAGGTCGTCGCCGTGCTG | CGTTGGCTCTGGCGATGTGG | ||||||||||||
| Cybb |
gp91phox |
204 |
Z 93.7 |
TTGGGTCAGCACTGGCTCTG | TGGCGGTGTGCAGTGCTATC | |||||||||
| Ddit3 |
chop variant 1+2 |
511 |
AGTCATGGCAGCTGAGTC | TCATGCTTGGTGCAGG | ||||||||||
| Dgat1 |
199 |
ACCGCGAGTTCTACA | AGGGGAACGCTCACTAGGTA | |||||||||||
| Dpp4 |
variant 1+2 |
184 | 91.9 | GTGGCAAGAGGGGATCACTA | CCCAGCCTGTGGTACTCATT | |||||||||
| Elovl6 | 110 | Z 88.0-92.0 | GAAAAGCAGTTCAACGAGAACG | TATCTTTGGTGGTCGGCATCT | ||||||||||
| Fabp4 | CCGCAGACGACAGGA | CTCATGCCCTTTCATAAACT | ||||||||||||
| Fasn | ’ 87.4-94.2 |
GAGAAGCCATGTGGGGAAGATTTC | TGAGCAGGGACAGGACAAGAC | |||||||||||
| 108 |
Z106.9% (2ρ) |
101.7(1)/1(1)/60 |
CATCCACTCAGGTTCAGGTG |
AGGTATGCTCGCTTCTCTGC |
||||||||||
| Fgf2 |
Z97.1-97.5 |
AACGGCGGCTTCTTCCTG | CACAACTCCTCTCTCTTCTGCTTG | |||||||||||
| Foxp3 |
variant 1+2+3 |
89 |
CCCAGGAAAGACAGCAACCTT | TTCTCACAACCAGGCCACTTG | ||||||||||
| G6pc |
228 |
Z |
TTACCAAGACTCCCAGGACTG | GAGCTGTTGCTGTAGTAGTCG | ||||||||||
| Gclc | TCCTGGAGGAAGGCATCGAT | CGGAACTCTACTCTCCATCC | ||||||||||||
| exon 2 | 94.9/0.975/1 |
102.5/0.99/1 |
95.9 | CATGTTGGTGTCCTTCGATCATG | TGGTTGGGGTTTGTCCTCTC | |||||||||
| Gdf11 |
TCTTCCCATGAACATCACACCTTG | ACCCTGACTGCCCTTCTCTTC | ||||||||||||
| Gys2 |
135 |
Z |
TAGAGCCCACATCACCACCAAC | TCTCATCCTCATCTTCTTCGTCTTC | ||||||||||
| Hmox1 |
101 |
GTCACTTCGTCAGAGGCCTGCTA | GCGGTGTCTGGGATGAGCTAGT | |||||||||||
| Hsd11b1 |
variant 1+2 |
159 |
Z 84.4 |
GCTCACTACATTGCTGGCACTATGG | TCTTCGCACAGAGTGGATGTCGTCA | |||||||||
| Hspa5 |
Grp78 variant 1+2 |
ACCTATTCCTGCGTCGGTGT | GCATCGAAGACCGTGTTCTC | |||||||||||
| Il6 | ACAACCACGGCCTTCCCTACTT | CACGATTTCCCAGAGAACATGTG | ||||||||||||
| Insig1 |
all (v1) |
100.5/1/2 |
TGCCCAAAGGAGGGAGGTTG |
TCCTCCAACTCACTGCTGCTC |
||||||||||
| Insig2 |
~ |
all (v1-14) |
97.4/1/2 |
ATAGCTGGCCGTTCCCTCTC | CACATGTGGGTGCTGTGACG | |||||||||
| Kdm1a |
variant 1+2 |
146 | Z92.7-110.0 | GGTATCTCGTTGGCGTGCTG | GTCTTGGGATTGGCTGTGG | |||||||||
| Lep | GATGGACCAGACTCTGGCAG | AGAGTGAGGCTTCCAGGACG | ||||||||||||
| Lipe |
HSL variant 1+2 |
213 |
CCGCTGACTTCCTGCAAGAG | CTGGGTCTATGGCGAATCGG | ||||||||||
| Lpl |
TGGGACTGAGGATGGCAAG | GGCAGGGTGAAGGGAATGT | ||||||||||||
| Z |
CCCTGAAGACACAGCTGAGG | GGGTGTACCCTAAGAGGTGG | ||||||||||||
| Metrnl |
ATGCCTTGGTGTGCCATTTAATAG | TGCTCCATACATTTCCATCACAG | ||||||||||||
| Mlxipl |
ChREBPΐ | CGAGGTCCCAGGATCCGA | TCCCGGCATAGCAACTTGAG | |||||||||||
| ChREBPΏ+ΐ | 88 | ~ | GCTCAACGCTGCCATCAAC | GTCCCGCATCTGGTCAAAG | ||||||||||
| 81 | Z 95.4 | Z100.5-103.3 | ~ | ATGTCGGTCTGTTTCCTCACAAC | TCCTGCTCTGCCTCTCTGCTC | |||||||||
| Nampt | 155 | 83.9-86.3 | GGCCACAAATTCCAGAGAACAG | CCAAATGAGCAGATGCCCCTAT | ||||||||||
| Ncf1 |
p47phox variant 1+2 |
212 |
Z 91.2 |
GATGTTCCCCATTGAGGCCG | GTTTCAGGTCATCAGGCCGC | |||||||||
| Nos2 | CAGCTGGGCTGTACAAACCTT | CATTGGAAGTGAAGCGTTTCG | ||||||||||||
| Nqo1 |
101 |
CGCCTGAGCCCAGATATTGTG | AGAATGGCTGGCACCCCAAA | |||||||||||
| Ostn | TGTGGACTTAGCATCACAGG | AGCTGAGAGTCTGTCAAGG | ||||||||||||
| Pparg |
variant 1+2 |
ATCTTAACTGCCGGATCCACAA | GCCCAAACCTGATGGCATT | |||||||||||
| TTAACTGCCGGATCCACAAAA | TGAGACATCCCCACAGCAAG | |||||||||||||
| 218 |
’93.4 |
CCAGAGTCTGCTGATCTGCG | GCCACCTCTTTGCTCTGCTC | |||||||||||
| Ppargc1a |
Pgc1Ώ |
Z93.9 |
CAGCCTCTTTGCCCAGATCT | CCGCTAGCAAGTTTGCCTCA | ||||||||||
| Pck1 |
65 |
’ |
CCACAGCTGCTGCAGAACA | GAAGGGTCGCATGGCAAA | ||||||||||
| Pdgfb |
Z99.5 |
ATTCCACTCCAGCCAAGCAG | GCCAGAACGTCATAATAGGCAAG | |||||||||||
| Plin2 | GAGCTGGAGATGGAAGCAAAA | GTGATAAGCCCGAGAGCAGAG | ||||||||||||
| Pnpla2 |
Atgl variant 1+2 |
193 |
Z83.6 |
GGTGACCATCTGCCTTCCAG | TGCAGAAGAGACCCAGCAGT | |||||||||
| Pygl |
96 |
Z |
AAGGGGTATGAGGCCAAAGAATATTAC | TGGCTGATTGGGAGAAAAGAAG | ||||||||||
| Rplp0 | 100.3/1/2 |
97.8(2)/1.00(2)/65 |
99.5/0.99/4 |
93.3/1/1 |
Z83.5-108 | Z94.6-102.7 | Z100.7 | AAAGGAAGAGTCGGAGGAATCAG | GGCTGACTTGGTTGCTTTGG | |||||
| Scd1 | 150 |
105.7(3)/1(3)/60 |
Z89.5-102.1 |
Z101.7 |
Z101 | TGGGTTGGCTGCTTGTG | GCGTGGGCAGGATGAAG | |||||||
| Serpine1 |
PAI1 |
193 |
TCAGCCCTTGCTTGCCTCAT | GCATAGCCAGCACCGAGGA | ||||||||||
| Slc2a1 |
Glut1 |
207 |
CCATCCACCACACTCACCAC | GCCCAGGATCAGCATCTCAA | ||||||||||
| Slc2a4 |
Glut4 |
101 |
GCGGATGCTATGGGTCCTTA | GTCCGGCCTCTGGTTTCAG | ||||||||||
| Sod1 |
168 |
89.7 |
CAGCATGGGTTCCACGTCCA | CACATTGGCCACACCGTCCT | ||||||||||
| Srebf1 |
variant 1+2 |
102.5/1/1 |
99.3(2)/0.99(1)/65 |
106.6(4)/0.998(4)/60 |
Z91.9-95.7 |
Z99.8-103.4 | TGCTCCTGTGTGATCTACTTCTTG | TGGGGTCCATTGCTGGTAC | ||||||
| Tgfb1 |
95 |
Z101.1 |
ACCATGCCAACTTCTGTCTG | CGGGTTGTGTTGGTTGTAGA | ||||||||||
| Th |
Z110.3 |
CGAGAGGACAGCATTCCACAG | CCAGAAAATCACGGGCAGAC | |||||||||||
| Timp1 |
variant 1 |
Z104.1-104.5 |
GTGGGAAATGCCGCAGAT | GGGCATATCCACAGAGGCTTT | ||||||||||
| Tnf |
variant 1+2 |
84.6-88.8 |
TGTGCTCAGAGCTTTCAACAAC | GCCCATTTGAGTCCTTGATG | ||||||||||
| Z97.8 | GGACAGTGACCTGGACTGTGG | AGTGAATTCGGAAAGCCCATT | ||||||||||||
| Ucp1 |
70 |
Z97.2-97.8 |
Z91.9 |
ATCAACTCTCTGCCAGGACAGT | GTCCTTCCTTGGTGTACATGGA | |||||||||
| Vegfa |
variant 1 |
Z92.3-101.7 |
TCTCTTGGGTGCACTGGACC | GTTACAGCAGCCTGCACAGC | ||||||||||
| Vegfb |
variant 1+2 |
Z101.3 |
TGACGATGGCCTGGAATG | GCATTCACATTGGCTGTGTTCTTC | ||||||||||
| Vegfc |
Z96.4 |
AGTGAAGAAGTATGCCGCTGTGTC | AAATGGTGGACTGAAAACTGGTATG | |||||||||||
| mouse/rat |
Cat |
198 |
Z89.9-103.7 |
CCAGCGACCAGATGAAGCAG | CCACTCTCTCAGGAATCCGC | |||||||||
| Rplp0 |
143 |
Z76.3-88.9 |
Z85.5 |
GCTCCAAGCAGATGCAGCA | CCGGATGTGAGGCAGCAG | |||||||||
| hamster |
Armc5 |
Z |
93.2/0.99/1 |
TGCCTTGAAGCCTTTGTGCG | AGCAGCATCTCACCCAGCTC | |||||||||
| Hmgcr |
Z |
102.2/1/1 |
GCCTGTCTGCAGATGCTAGG |
TCAAGGACAACTCCCCAGCC |
||||||||||
| Hmgcs1 |
Z |
all (X1, X2) |
103.5/1/1 |
GATGCCACACCAGGATCTGC |
ATCTGGCGCCACACATGTTC |
|||||||||
| Idi1 |
Z |
all (X1, X2) |
76.9/0.97/1 |
TTGGGAATACCCTTAGAAGAGGTTG |
GGGATCCGGATTCAAGGTTACG |
|||||||||
| Ldlr |
Z |
99.7/1/1 |
TGAGATCACTGCAGGAGCCG |
TGTCACCCTGGACTTGGTGG |
||||||||||
| Rplp0 |
Z |
all (1,2) |
97.4/1/2 |
CTGCTGGCCAATAAGGTGCC | AGACCAGTGTTCTGGGCTGG | |||||||||
| Sqle |
Z |
125.8/0.98/1 |
GTGGGGAAATGCCGAGGAAC |
TGGTTCCTTCAGGTGCTCAGG |
||||||||||
| »ΜΌ | rCat-rabbitΐglobin | 91 | ACTGACGTCCACCCTGACTA | GCACCTGAGGAGTGAATTGG | ||||||||||
| FLPe | Z108.5 | CCTACAGCTCCTGGGCAACGTGC | CTGCTTCTTCCGATGATTCG | |||||||||||